monocle安装不成功 想尽各种办法
https://github.com/cole-trapnell-lab/monocle3/issues/552
library(monocle)
Error: package or namespace load failed for ‘monocle’:
'namespace:BiocGenerics’沒有出口‘clusterApply’這個對象
library(monocle, lib.loc = “D:/Win10 System/Documents/R/win-library/4.1”)
Error: package or namespace load failed for ‘monocle’:
'namespace:BiocGenerics’沒有出口‘clusterApply’這個對象
https://github.com/cole-trapnell-lab/monocle3/issues/552
additionally, when i use
devtools::install_github('cole-trapnell-lab/monocle3'), it can installed correctely. but cannot work correctely
library(monocle)
Error: package or namespace load failed for ‘monocle’:
'namespace:BiocGenerics’沒有出口‘clusterApply’這個對象
library(monocle3)
Error: package or namespace load failed for ‘monocle3’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
載入了名字空間‘future’ 1.22.1,但需要的是>= 1.23.0
#devtools::install_github(‘cole-trapnell-lab/monocle3’)
#devtools::install_github(‘HenrikBengtsson/future’)
#成功!!!
yes, it’s a bug on 2.20.0 version, you can find the updated version on monocle2 archive page here https://www.bioconductor.org/packages/3.14/bioc/src/contrib/Archive/monocle/ , its 2.21.1, after installing it manually, everything is back to normal!
總結
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