我有以下

shellscript：

#!/bin/sh

cd /sw/local/bin/

export LD_LIBRARY_PATH=/sw/local/lib:/usr/local/Trolltech/Qt-4.7.2/lib:$LD_LIBRARY_PATH

./FeatureFinderRaw -in /homes/JG-C1-18.mzML -out /homes/test_remove_after_use.featureXML -threads 20

當我從自己的命令行運行它時,它工作正常,但是當我嘗試做：

qsub -q ningal.q -cwd -V -o /homes/queue.out -e /queue.err featureFind_C1-18_20t.sh

我收到以下錯誤：

/bin/sh: module: line 1: Syntax error: unexpected end of file

/bin/sh: error importing function definition for `module'

./FeatureFinderRaw: error while loading shared libraries: libOpenMS.so: cannot open shared object file: No such file or directory

/bin/sh: module: line 1: Syntax error: unexpected end of file

/bin/sh: error importing function definition for `module'

./FeatureFinderRaw: error while loading shared libraries: libQtWebKit.so.4: cannot open shared object file: No such file or directory

/bin/sh: module: line 1: Syntax error: unexpected end of file

/bin/sh: error importing function definition for `module'

./FeatureFinderRaw: error while loading shared libraries: libQtWebKit.so.4: cannot open shared object file: No such file or directory

/bin/bash: module: line 1: Syntax error: unexpected end of file

/bin/bash: error importing function definition for `module'

./FeatureFinderRaw: error while loading shared libraries: libQtWebKit.so.4: cannot open shared object file: No such file or directory

/bin/sh: module: line 1: Syntax error: unexpected end of file

/bin/sh: error importing function definition for `module'

./FeatureFinderRaw: error while loading shared libraries: libQtWebKit.so.4: cannot open shared object file: No such file or directory

/bin/sh: module: line 1: Syntax error: unexpected end of file

/bin/sh: error importing function definition for `module'

我不明白為什么在使用qsub時會收到此錯誤,但是在直接在同一個集群機器上運行腳本時卻并不明白.如何使用qsub運行腳本？

總結

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